Copyright © 1999 The American Society of Human Genetics. All rights reserved.
The American Journal of Human Genetics, Volume 65, Issue 5, 1437-1448, 1 November 1999
doi:10.1086/302617
Matthew E. Hurles1, *, Reiner Veitia2, *, Eduardo Arroyo3, Manuel Armenteros4, Jaume Bertranpetit5, †, Anna Pérez-Lezaun5, †, Elena Bosch5, †, Maria Shlumukova1, ‡, Anne Cambon-Thomsen6, Ken McElreavey2, Adolfo López de Munain7, Arne Röhl8, Ian J. Wilson9, §, Lalji Singh10, Arpita Pandya11, Fabrício R. Santos11, ∥, Chris Tyler-Smith11 and Mark A. Jobling1,
, 
1 Department of Genetics, University of Leicester, University Road, Leicester, United Kingdom
2 Unité d'Immunogénétique Humaine, Institut Pasteur, Paris
3 Universidad Complutense de Madrid, Facultad de Medicina, Policia Judicial, Guardia Civil, Madrid
4 Centro de Investigacion y Criminalistica, Laboratorio de ADN, Policia Judicial, Guardia Civil, Madrid
5 Unitat d'Anthropologia, Departimento de Biologia Animal, Universitat de Barcelona, Barcelona
6 INSERM U518, Faculté de Médecine, Toulouse
7 Servicio de Neurologia, Arantzazuko Amaren Ospitalea, San Sebastian, Spain
8 Mathematisches Seminar, Universität Hamburg, Hamburg
9 School of Biological Sciences, Queen Mary and Westfield College, London
10 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad; India
11 CRC Chromosome Molecular Biology Group, Department of Biochemistry, University of Oxford, Oxford
Address for correspondence and reprints: Dr. Mark A. Jobling, Department of Genetics, University of Leicester, University Road, Leicester LE1 7RH, United KingdomAbstract
We have examined the worldwide distribution of a Y-chromosomal base-substitution polymorphism, the T/C transition at SRY-2627, where the T allele defines haplogroup 22; sequencing of primate homologues shows that the ancestral state cannot be determined unambiguously but is probably the C allele. Of 1,191 human Y chromosomes analyzed, 33 belong to haplogroup 22. Twenty-nine come from Iberia, and the highest frequencies are in Basques (11%; n=117) and Catalans (22%; n=32). Microsatellite and minisatellite (MSY1) diversity analysis shows that non-Iberian haplogroup-22 chromosomes are not significantly different from Iberian ones. The simplest interpretation of these data is that haplogroup 22 arose in Iberia and that non-Iberian cases reflect Iberian emigrants. Several different methods were used to date the origin of the polymorphism: microsatellite data gave ages of 1,650, 2,700, 3,100, or 3,450 years, and MSY1 gave ages of 1,000, 2,300, or 2,650 years, although 95% confidence intervals on all of these figures are wide. The age of the split between Basque and Catalan haplogroup-22 chromosomes was calculated as only 20% of the age of the lineage as a whole. This study thus provides evidence for direct or indirect gene flow over the substantial linguistic barrier between the Indo-European and non–Indo-European–speaking populations of the Catalans and the Basques, during the past few thousand years.
| Estimating Scandinavian and Gaelic Ancestry in the Male Settlers of Iceland The American Journal of Human Genetics, Volume 67, Issue 3, 1 September 2000, Pages 697-717 Agnar Helgason, Sigrún Sigurðardóttir, Jayne Nicholson, Bryan Sykes, Emmeline W. Hill, Daniel G. Bradley, Vidar Bosnes, Jeffery R. Gulcher, Ryk Ward and Kári Stefánsson Abstract We present findings based on a study of Y-chromosome diallelic and microsatellite variation in 181 Icelanders, 233 Scandinavians, and 283 Gaels from Ireland and Scotland. All but one of the Icelandic Y chromosomes belong to haplogroup 1 (41.4%), haplogroup 2 (34.2%), or haplogroup 3 (23.8%). We present phylogenetic networks of Icelandic Y-chromosome variation, using haplotypes constructed from seven diallelic markers and eight microsatellite markers, and we propose two new clades. We also report, for the first time, the phylogenetic context of the microsatellite marker DYS385 in Europe. A comparison of haplotypes based on six diallelic loci and five microsatellite loci indicates that some Icelandic haplogroup-1 chromosomes are likely to have a Gaelic origin, whereas for most Icelandic haplogroup-2 and -3 chromosomes, a Scandinavian origin is probable. The data suggest that 20%–25% of Icelandic founding males had Gaelic ancestry, with the remainder having Norse ancestry. The closer relationship with the Scandinavian Y-chromosome pool is supported by the results of analyses of genetic distances and lineage sharing. These findings contrast with results based on mtDNA data, which indicate closer matrilineal links with populations of the British Isles. This supports the model, put forward by some historians, that the majority of females in the Icelandic founding population had Gaelic ancestry, whereas the majority of males had Scandinavian ancestry. Abstract | | |
| A Genetic Landscape Reshaped by Recent Events: Y-Chromosomal Insights into Central Asia The American Journal of Human Genetics, Volume 71, Issue 3, 1 September 2002, Pages 466-482 Tatiana Zerjal, R. Spencer Wells, Nadira Yuldasheva, Ruslan Ruzibakiev and Chris Tyler-Smith Abstract Sixteen Y-chromosomal microsatellites and 16 binary markers have been used to analyze DNA variation in 408 male subjects from 15 populations in Central Asia. Large genetic differences were found between populations, but these did not display an obvious geographical or linguistic pattern like that usually seen for Y-chromosomal variation. Nevertheless, an underlying east-west clinal pattern could be detected by the Autocorrelation Index for DNA Analysis and admixture analysis, and this pattern was interpreted as being derived from the ancient peopling of the area, reinforced by subsequent migrations. Two particularly striking features were seen: an extremely high level of Y-chromosomal differentiation between geographically close populations, accompanied by low diversity within some populations. These were due to the presence of high-frequency population-specific lineages and suggested the occurrence of several recent bottlenecks or founder events. Such events could account for the lack of a clear overall pattern and emphasize the importance of multiple recent events in reshaping this genetic landscape. Abstract | | |
| A Back Migration from Asia to Sub-Saharan Africa Is Supported by High-Resolution Analysis of Human Y-Chromosome Haplotypes The American Journal of Human Genetics, Volume 70, Issue 5, 1 May 2002, Pages 1197-1214 Fulvio Cruciani, Piero Santolamazza, Peidong Shen, Vincent Macaulay, Pedro Moral, Antonel Olckers, David Modiano, Susan Holmes, Giovanni Destro-Bisol, Valentina Coia, Douglas C. Wallace, Peter J. Oefner, Antonio Torroni, L. Luca Cavalli-Sforza, Rosaria Scozzari and Peter A. Underhill Abstract The variation of 77 biallelic sites located in the nonrecombining portion of the Y chromosome was examined in 608 male subjects from 22 African populations. This survey revealed a total of 37 binary haplotypes, which were combined with microsatellite polymorphism data to evaluate internal diversities and to estimate coalescence ages of the binary haplotypes. The majority of binary haplotypes showed a nonuniform distribution across the continent. Analysis of molecular variance detected a high level of interpopulation diversity (ΦST=0.342), which appears to be partially related to the geography (ΦCT=0.230). In sub-Saharan Africa, the recent spread of a set of haplotypes partially erased pre-existing diversity, but a high level of population (ΦST=0.332) and geographic (ΦCT=0.179) structuring persists. Correspondence analysis shows that three main clusters of populations can be identified: northern, eastern, and sub-Saharan Africans. Among the latter, the Khoisan, the Pygmies, and the northern Cameroonians are clearly distinct from a tight cluster formed by the Niger-Congo–speaking populations from western, central western, and southern Africa. Phylogeographic analyses suggest that a large component of the present Khoisan gene pool is eastern African in origin and that Asia was the source of a back migration to sub-Saharan Africa. Haplogroup IX Y chromosomes appear to have been involved in such a migration, the traces of which can now be observed mostly in northern Cameroon. Abstract | | |