Copyright © 1999 The American Society of Human Genetics. All rights reserved.
The American Journal of Human Genetics, Volume 65, Issue 1, 104-110, 1 July 1999
doi:10.1086/302467
Miguel Del Campo1, Marilyn C. Jones3, Alexey N. Veraksa2, Cindy J. Curry4, Kenneth L. Jones1, James T. Mascarello3, Zohra Ali-Kahn-Catts4, Timothy Drumheller4 and William McGinnis2,
, 
1 Division of Dysmorphology, Department of Pediatrics, San Diego, La Jolla
2 Department of Biology, University of California, San Diego, La Jolla
3 Division of Dysmorphology and Genetics, Children's Hospital, San Diego
4 Genetic Medicine, Valley Children's Hospital/UCSF, Madera, CA
Address for correspondence and reprints: Dr. William McGinnis, Department of Biology 0349, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0349Abstract
Vertebrates have four clusters of Hox genes (HoxA, HoxB, HoxC, and HoxD). A variety of expression and mutation studies indicate that posterior members of the HoxA and HoxD clusters play an important role in vertebrate limb development. In humans, mutations in HOXD13 have been associated with type II syndactyly or synpolydactyly, and, in HOXA13, with hand-foot-genital syndrome. We have investigated two unrelated children with a previously unreported pattern of severe developmental defects on the anterior-posterior (a-p) limb axis and in the genitalia, consisting of a single bone in the zeugopod, either monodactyly or oligodactyly in the autopod of all four limbs, and penoscrotal hypoplasia. Both children are heterozygous for a deletion that eliminates at least eight (HOXD3–HOXD13) of the nine genes in the HOXD cluster. We propose that the patients' phenotypes are due in part to haploinsufficiency for HOXD-cluster genes. This hypothesis is supported by the expression patterns of these genes in early vertebrate embryos. However, the involvement of additional genes in the region could explain the discordance, in severity, between these human phenotypes and the milder, non-polarized phenotypes present in mice hemizygous for HoxD cluster genes. These cases represent the first reported examples of deficiencies for an entire Hox cluster in vertebrates and suggest that the diploid dose of human HOXD genes is crucial for normal growth and patterning of the limbs along the anterior-posterior axis.
| A 117-kb Microdeletion Removing HOXD9–HOXD13 and EVX2 Causes Synpolydactyly The American Journal of Human Genetics, Volume 70, Issue 2, 1 February 2002, Pages 547-555 Frances R. Goodman, Frank Majewski, Amanda L. Collins and Peter J. Scambler Abstract Studies in mouse and chick have shown that the 5′ HoxD genes play major roles in the development of the limbs and genitalia. In humans, mutations in HOXD13 cause the dominantly inherited limb malformation synpolydactyly (SPD). Haploinsufficiency for the 5′ HOXD genes has recently been proposed to underlie the monodactyly and penoscrotal hypoplasia in two children with chromosomal deletions encompassing the entire HOXD cluster. Similar deletions, however, have previously been associated with split–hand/foot malformation (SHFM), including monodactyly. Here we report a father and daughter with SPD who carry a 117-kb microdeletion at the 5′ end of the HOXD cluster. By sequencing directly across the deletion breakpoint, we show that this microdeletion removes only HOXD9–HOXD13 and EVX2. We also report a girl with bilateral split foot and a chromosomal deletion that includes the entire HOXD cluster and extends ∼5 Mb centromeric to it. Our findings indicate that haploinsufficiency for the 5′ HOXD genes causes not SHFM but SPD and point to the presence of a novel locus for SHFM in the interval between EVX2 and D2S294. They also suggest that there is a regulatory region, upstream of the HOXD cluster, that is responsible for activating the cluster as a whole. Abstract | | |
| Missense Mutations in the Homeodomain of HOXD13 Are Associated with Brachydactyly Types D and E The American Journal of Human Genetics, Volume 72, Issue 4, 1 April 2003, Pages 984-997 David Johnson, Shih-hsin Kan, Michael Oldridge, Richard C. Trembath, Philippe Roche, Robert M. Esnouf, Henk Giele and O.M. Andrew Wilkie Abstract HOXD13, the most 5′ gene of the HOXD cluster, encodes a homeodomain transcription factor with important functions in limb patterning and growth. Heterozygous mutations of human HOXD13, encoding polyalanine expansions or frameshifts, are believed to act by dominant negative or haploinsufficiency mechanisms and are predominantly associated with synpolydactyly phenotypes. Here, we describe two mutations of HOXD13 (923C→G encoding Ser308Cys and 940A→C encoding Ile314Leu) that cause missense substitutions within the homeodomain. Both are associated with distinctive limb phenotypes in which brachydactyly of specific metacarpals, metatarsals, and phalangeal bones is the most constant feature, exhibiting overlap with brachydactyly types D and E. We investigated the binding of synthetic mutant proteins to double-stranded DNA targets in vitro. No consistent differences were found for the Ser308Cys mutation compared with the wild type, but the Ile314Leu mutation (which resides at the 47th position of the homeodomain) exhibited increased affinity for a target containing the core recognition sequence 5′-TTAC-3′ but decreased affinity for a 5′-TTAT-3′ target. Molecular modeling of the Ile314Leu mutation indicates that this mixed gain and loss of affinity may be accounted for by the relative positions of methyl groups in the amino acid side chain and target base. Abstract | | |
| Genetic Disorders of the Skeleton: A Developmental Approach The American Journal of Human Genetics, Volume 73, Issue 3, 1 September 2003, Pages 447-474 Uwe Kornak and Stefan Mundlos Abstract Although disorders of the skeleton are individually rare, they are of clinical relevance because of their overall frequency. Many attempts have been made in the past to identify disease groups in order to facilitate diagnosis and to draw conclusions about possible underlying pathomechanisms. Traditionally, skeletal disorders have been subdivided into dysostoses, defined as malformations of individual bones or groups of bones, and osteochondrodysplasias, defined as developmental disorders of chondro-osseous tissue. In light of the recent advances in molecular genetics, however, many phenotypically similar skeletal diseases comprising the classical categories turned out not to be based on defects in common genes or physiological pathways. In this article, we present a classification based on a combination of molecular pathology and embryology, taking into account the importance of development for the understanding of bone diseases. Abstract | | |